RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g15820.1 View Network Show in Genome Browser |
| Other Names | Os09g0327400 |
| Description | aldose 1-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 9655424-9659127 Nucleotide Length: 960 |
| Protein-coding | LOC_Os09g15820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38530 LOC_Os03g26430 LOC_Os03g53710 LOC_Os03g06230 LOC_Os06g13650 LOC_Os02g36600 LOC_Os04g38540 LOC_Os03g22780 LOC_Os03g03360 LOC_Os02g38240 LOC_Os01g59060 More.. |
| Downstream Genes | LOC_Os09g17630 LOC_Os10g06720 LOC_Os11g32260 LOC_Os12g35330 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g15820.1 |
| Rice Genome Annotation | LOC_Os09g15820.1 |
| Ricechip | LOC_Os09g15820.1 |
| KEGG | osa:4346747 dosa:Os09t0327400-01 |
| Entrez-Gene | 4346747 |