RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g16449.1 View Network Show in Genome Browser |
| Other Names | Os09g0333500 |
| Description | pleiotropic drug resistance protein 4, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10066480-10069846 Nucleotide Length: 1437 |
| Protein-coding | LOC_Os09g16449 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g25010 LOC_Os07g44710 |
| Downstream Genes | LOC_Os12g12860 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2868 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g16449.1 |
| Rice Genome Annotation | LOC_Os09g16449.1 |
| Ricechip | LOC_Os09g16449.1 |
| KEGG | osa:4346766 dosa:Os09t0333500-01 |
| Entrez-Gene | 4346766 |