RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g16910.3 View Network Show in Genome Browser |
| Other Names | Os09g0338400 |
| Description | cysteine desulfurase 1, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10328808-10330646 Nucleotide Length: 1377 |
| Protein-coding | LOC_Os09g16910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47340 LOC_Os05g49300 LOC_Os03g06200 LOC_Os08g39300 LOC_Os06g05400 LOC_Os07g01930 LOC_Os04g43650 LOC_Os01g18640 LOC_Os01g01080 LOC_Os06g45860 LOC_Os08g14070 More.. |
| Downstream Genes | LOC_Os12g27070 LOC_Os12g30030 LOC_Os09g26650 LOC_Os10g26640 LOC_Os10g41150 LOC_Os12g08280 LOC_Os10g10434 LOC_Os12g37560 LOC_Os10g41410 LOC_Os09g29190 LOC_Os12g36194 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g16910.3 |
| Rice Genome Annotation | LOC_Os09g16910.3 |
| Ricechip | LOC_Os09g16910.3 |
| KEGG | osa:4346775 dosa:Os09t0338400-01 |
| Entrez-Gene | 4346775 |