RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g17730.1 View Network Show in Genome Browser |
| Other Names | Os09g0346400 |
| Description | proton pump interactor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10834936-10844001 Nucleotide Length: 1884 |
| Protein-coding | LOC_Os09g17730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g56160 LOC_Os03g02970 LOC_Os03g38740 LOC_Os04g43050 LOC_Os09g14610 LOC_Os01g72800 |
| Downstream Genes | LOC_Os10g34430 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g17730.1 |
| Rice Genome Annotation | LOC_Os09g17730.1 |
| Ricechip | LOC_Os09g17730.1 |
| KEGG | osa:4346802 dosa:Os09t0346400-01 |
| Entrez-Gene | 4346802 |