RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g17740.1 View Network Show in Genome Browser |
| Other Names | Os09g0346500 |
| Description | chlorophyll A-B binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10845678-10847156 Nucleotide Length: 798 |
| Protein-coding | LOC_Os09g17740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g37240 LOC_Os05g50510 LOC_Os04g33830 LOC_Os06g21590 LOC_Os07g47640 LOC_Os07g38960 LOC_Os02g37060 LOC_Os08g35760 LOC_Os02g48720 LOC_Os07g32880 LOC_Os05g48630 More.. |
| Downstream Genes | LOC_Os11g13890 LOC_Os09g30340 LOC_Os12g08770 LOC_Os12g23200 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os12g02330 LOC_Os12g05430 More.. |
| Reference | |
|---|---|
| PubMed | 11489174 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g17740.1 |
| Rice Genome Annotation | LOC_Os09g17740.1 |
| Ricechip | LOC_Os09g17740.1 |
| KEGG | osa:4346803 dosa:Os09t0346500-04 |
| Entrez-Gene | 4346803 |