RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g17750.1 View Network Show in Genome Browser |
| Other Names | Os09g0346600 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10849736-10853196 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os09g17750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g37130 LOC_Os05g04870 LOC_Os04g52400 LOC_Os03g62590 LOC_Os03g61740 LOC_Os03g59610 LOC_Os03g45194 LOC_Os03g18740 LOC_Os02g47350 LOC_Os03g51610 |
| Downstream Genes | LOC_Os12g41590 LOC_Os11g32030 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn01100 rn01110 rn01120 |
| Metacyc Pathways | PWY-5078 PWY-5057 P127-PWY FERMENTATION-PWY PWY-3801 PWY66-21 PWY-5082 PWY-5079 PWY-5076 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g17750.1 |
| Rice Genome Annotation | LOC_Os09g17750.1 |
| Ricechip | LOC_Os09g17750.1 |
| KEGG | osa:4346804 dosa:Os09t0346600-01 |
| Entrez-Gene | 4346804 |