RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g17870.1 View Network Show in Genome Browser |
| Other Names | Os09g0347900 |
| Description | cytidylyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 10928396-10930718 Nucleotide Length: 516 |
| Protein-coding | LOC_Os09g17870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56980 LOC_Os02g07720 LOC_Os07g08210 LOC_Os02g05680 LOC_Os08g06450 LOC_Os08g12830 LOC_Os06g51150 LOC_Os03g44150 LOC_Os03g03910 LOC_Os07g33850 LOC_Os06g07960 More.. |
| Downstream Genes | LOC_Os11g03050 LOC_Os12g02820 LOC_Os10g42790 LOC_Os10g24810 LOC_Os11g05970 LOC_Os12g38110 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 |
| Metacyc Pathways | NADBIOSYNTHESISII |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g17870.1 |
| Rice Genome Annotation | LOC_Os09g17870.1 |
| Ricechip | LOC_Os09g17870.1 |
| KEGG | osa:9269619 dosa:Os09t0347900-01 |
| Entrez-Gene | 9269619 |