RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g19734.1 View Network Show in Genome Browser
Other Names	Os09g0361500,Os09g0361400
Description	isochorismate synthase 1, chloroplast precursor, putative, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 11805571-11809076 Nucleotide Length: 2445
Protein-coding	LOC_Os09g19734

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g16910 LOC_Os03g20750 LOC_Os08g17680 LOC_Os03g05520 LOC_Os03g03450 LOC_Os07g08430 LOC_Os02g08180 LOC_Os06g49480 LOC_Os01g38510 LOC_Os02g37090 LOC_Os05g36070 More..
Downstream Genes	LOC_Os11g09280 LOC_Os11g38780 LOC_Os09g27830 LOC_Os10g32550 LOC_Os11g37920 LOC_Os10g30860 LOC_Os12g07490 LOC_Os09g20090 LOC_Os10g38950 LOC_Os12g32950 LOC_Os09g31180 More..

Pathways
Metacyc Pathways	ENTBACSYN-PWY PWY-5027 MENAQUINONESYN-PWY PWY-981

Database Links
Gramene	LOC_Os09g19734.1
Rice Genome Annotation	LOC_Os09g19734.1
Ricechip	LOC_Os09g19734.1
KEGG	osa:9268489 osa:4346851 dosa:Os09t0361500-01 dosa:Os09t0361400-01
Entrez-Gene	9268489