RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g19790.1 View Network Show in Genome Browser |
| Other Names | Os09g0362500 |
| Description | puromycin-sensitive aminopeptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 11843701-11851263 Nucleotide Length: 2637 |
| Protein-coding | LOC_Os09g19790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28510 LOC_Os06g09170 LOC_Os04g40650 LOC_Os06g07630 LOC_Os06g47210 LOC_Os08g43640 LOC_Os02g50230 LOC_Os02g45650 LOC_Os01g67590 LOC_Os07g10150 LOC_Os05g22940 More.. |
| Downstream Genes | LOC_Os10g33770 LOC_Os12g31380 LOC_Os09g37000 LOC_Os12g19090 LOC_Os11g07280 LOC_Os09g30418 LOC_Os09g30412 LOC_Os12g28270 LOC_Os10g30580 LOC_Os12g38110 LOC_Os12g24080 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn01100 |
| Metacyc Pathways | PWY-4041 PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g19790.1 |
| Rice Genome Annotation | LOC_Os09g19790.1 |
| Ricechip | LOC_Os09g19790.1 |
| KEGG | osa:4346854 dosa:Os09t0362500-01 |
| Entrez-Gene | 4346854 |