RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g20640.1 View Network Show in Genome Browser |
| Other Names | Os09g0372800 |
| Description | serine/threonine-protein kinase 16, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 12431007-12434574 Nucleotide Length: 1014 |
| Protein-coding | LOC_Os09g20640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g05380 LOC_Os06g06090 LOC_Os03g17700 LOC_Os03g56110 LOC_Os03g02680 LOC_Os09g04800 LOC_Os09g10720 LOC_Os03g56140 LOC_Os03g01850 LOC_Os08g06060 LOC_Os02g03060 More.. |
| Downstream Genes | LOC_Os10g28640 LOC_Os10g38950 LOC_Os10g42950 LOC_Os10g37630 LOC_Os11g41180 LOC_Os11g38310 LOC_Os10g10500 LOC_Os09g38550 LOC_Os10g39540 LOC_Os11g44840 LOC_Os10g37210 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g20640.1 |
| Rice Genome Annotation | LOC_Os09g20640.1 |
| Ricechip | LOC_Os09g20640.1 |
| KEGG | osa:4346899 dosa:Os09t0372800-01 |
| Entrez-Gene | 4346899 |