RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g20684.1 View Network Show in Genome Browser |
| Other Names | |
| Description | SMP-30/Gluconolaconase/LRE-like region containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 12454365-12460996 Nucleotide Length: 1095 |
| Protein-coding | LOC_Os09g20684 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28620 LOC_Os04g28520 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5290 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g20684.1 |
| Rice Genome Annotation | LOC_Os09g20684.1 |
| Ricechip | LOC_Os09g20684.1 |