RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g20780.1 View Network Show in Genome Browser |
| Other Names | Os09g0374500 |
| Description | RNA recognition motif containing protein, putative |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 12520957-12521244 Nucleotide Length: 288 |
| Protein-coding | LOC_Os09g20780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42600 LOC_Os06g37000 LOC_Os02g40900 LOC_Os04g54440 LOC_Os01g72834 LOC_Os07g46820 LOC_Os04g37690 LOC_Os03g46770 LOC_Os07g06450 LOC_Os05g13630 LOC_Os05g13620 More.. |
| Downstream Genes | LOC_Os12g31800 LOC_Os11g41890 LOC_Os10g17454 LOC_Os12g43600 LOC_Os12g01010 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g20780.1 |
| Rice Genome Annotation | LOC_Os09g20780.1 |
| Ricechip | LOC_Os09g20780.1 |