RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g20830.5 View Network Show in Genome Browser |
| Other Names | Os09g0375100 |
| Description | heat shock factor-binding protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 12546667-12550339 Nucleotide Length: 186 |
| Protein-coding | LOC_Os09g20830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g54550 LOC_Os05g08840 LOC_Os03g06630 LOC_Os07g08140 LOC_Os03g58160 LOC_Os03g53340 LOC_Os03g63750 LOC_Os05g45410 LOC_Os03g16920 LOC_Os02g32590 More.. |
| Downstream Genes | LOC_Os10g28340 LOC_Os12g42160 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g20830.5 |
| Rice Genome Annotation | LOC_Os09g20830.5 |
| Ricechip | LOC_Os09g20830.5 |
| KEGG | dosa:Os09t0375100-01 |
| Entrez-Gene | 9271232 |