RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g21120.1 View Network Show in Genome Browser |
| Other Names | Os09g0378700 |
| Description | armadillo/beta-catenin repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 12746534-12749125 Nucleotide Length: 2139 |
| Protein-coding | LOC_Os09g21120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34080 LOC_Os05g33050 LOC_Os04g59494 LOC_Os02g52370 LOC_Os05g28510 LOC_Os03g18350 |
| Downstream Genes | LOC_Os09g36550 LOC_Os10g41360 LOC_Os12g24550 LOC_Os12g38110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g21120.1 |
| Rice Genome Annotation | LOC_Os09g21120.1 |
| Ricechip | LOC_Os09g21120.1 |
| KEGG | osa:4346922 dosa:Os09t0378700-00 |
| Entrez-Gene | 4346922 |