RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g21520.2 View Network Show in Genome Browser |
| Other Names | Os09g0383400 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13018787-13023173 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os09g21520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12890 LOC_Os02g01230 LOC_Os01g33030 LOC_Os05g08360 LOC_Os02g57590 LOC_Os01g57910 LOC_Os03g63410 LOC_Os07g47420 LOC_Os07g20580 LOC_Os08g09350 LOC_Os03g62490 More.. |
| Downstream Genes | LOC_Os09g29840 LOC_Os10g32550 LOC_Os12g03822 LOC_Os11g03990 LOC_Os12g01430 LOC_Os11g23790 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR408-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g21520.2 |
| Rice Genome Annotation | LOC_Os09g21520.2 |
| Ricechip | LOC_Os09g21520.2 |
| KEGG | osa:4346941 dosa:Os09t0383400-01 |
| Entrez-Gene | 4346941 |