RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g21760.1 View Network Show in Genome Browser |
| Other Names | Os09g0386400 |
| Description | proteasome subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13174382-13178163 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os09g21760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g36700 LOC_Os04g56070 LOC_Os03g63430 LOC_Os01g32800 LOC_Os01g03070 LOC_Os08g43640 LOC_Os04g40850 LOC_Os03g11570 LOC_Os02g38810 LOC_Os02g58090 LOC_Os07g10256 More.. |
| Downstream Genes | LOC_Os09g37000 LOC_Os12g42140 LOC_Os10g34520 LOC_Os10g34380 LOC_Os10g35550 LOC_Os10g02630 LOC_Os11g43620 LOC_Os10g31900 LOC_Os09g30418 LOC_Os09g30412 LOC_Os10g18150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g21760.1 |
| Rice Genome Annotation | LOC_Os09g21760.1 |
| Ricechip | LOC_Os09g21760.1 |
| KEGG | osa:4346949 dosa:Os09t0386400-01 |
| Entrez-Gene | 4346949 |