RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g21770.1 View Network Show in Genome Browser |
| Other Names | Os09g0386500 |
| Description | ES43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13181330-13184741 Nucleotide Length: 651 |
| Protein-coding | LOC_Os09g21770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01970 LOC_Os04g54340 LOC_Os07g30980 LOC_Os03g51220 LOC_Os03g58400 LOC_Os02g06592 LOC_Os08g32620 LOC_Os01g42460 LOC_Os08g33420 LOC_Os07g08880 LOC_Os03g12570 More.. |
| Downstream Genes | LOC_Os10g31900 LOC_Os12g39070 LOC_Os09g33980 LOC_Os12g34330 LOC_Os12g24540 LOC_Os11g18770 LOC_Os12g34510 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os11g16540 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p osa-miR172b |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g21770.1 |
| Rice Genome Annotation | LOC_Os09g21770.1 |
| Ricechip | LOC_Os09g21770.1 |
| KEGG | osa:4346950 dosa:Os09t0386500-01 |
| Entrez-Gene | 4346950 |