RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g23380.1 View Network Show in Genome Browser |
| Other Names | Os09g0397900 |
| Description | metallo-beta-lactamase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13891777-13897441 Nucleotide Length: 1680 |
| Protein-coding | LOC_Os09g23380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21460 LOC_Os01g13150 LOC_Os09g19920 LOC_Os02g58270 LOC_Os02g53060 LOC_Os06g04800 LOC_Os03g48930 LOC_Os06g06030 LOC_Os01g04200 LOC_Os06g43570 LOC_Os05g09490 More.. |
| Downstream Genes | LOC_Os09g34100 LOC_Os09g32800 LOC_Os09g33986 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g23380.1 |
| Rice Genome Annotation | LOC_Os09g23380.1 |
| Ricechip | LOC_Os09g23380.1 |
| KEGG | osa:4346985 dosa:Os09t0397900-01 |
| Entrez-Gene | 4346985 |