RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g23550.1 View Network Show in Genome Browser |
| Other Names | Os09g0400300 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13994541-13996756 Nucleotide Length: 1320 |
| Protein-coding | LOC_Os09g23550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41960 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 LOC_Os01g28450 LOC_Os06g37440 LOC_Os02g32490 LOC_Os02g12794 LOC_Os02g12800 LOC_Os03g30830 More.. |
| Downstream Genes | LOC_Os12g01160 LOC_Os11g01154 LOC_Os11g16410 LOC_Os10g18340 LOC_Os10g05660 LOC_Os09g36560 LOC_Os10g40590 LOC_Os12g04440 LOC_Os11g04670 LOC_Os10g36500 LOC_Os10g29470 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g23550.1 |
| Rice Genome Annotation | LOC_Os09g23550.1 |
| Ricechip | LOC_Os09g23550.1 |
| KEGG | osa:9269515 dosa:Os09t0400300-01 |
| Entrez-Gene | 9269515 |