RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g23690.1 View Network Show in Genome Browser |
| Other Names | Os09g0401600 |
| Description | UBX domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14083859-14087562 Nucleotide Length: 1302 |
| Protein-coding | LOC_Os09g23690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g28820 LOC_Os03g05730 LOC_Os04g39040 LOC_Os08g43300 LOC_Os04g58090 LOC_Os06g42810 LOC_Os01g25100 LOC_Os02g53500 LOC_Os09g02284 LOC_Os08g08220 LOC_Os04g53720 More.. |
| Downstream Genes | LOC_Os10g30580 LOC_Os11g18880 LOC_Os09g35710 LOC_Os10g37630 LOC_Os10g32550 LOC_Os09g36480 LOC_Os11g42350 LOC_Os10g35000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g23690.1 |
| Rice Genome Annotation | LOC_Os09g23690.1 |
| Ricechip | LOC_Os09g23690.1 |
| KEGG | osa:4347001 dosa:Os09t0401600-00 |
| Entrez-Gene | 4347001 |