RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g23740.1 View Network Show in Genome Browser |
| Other Names | Os09g0402300 |
| Description | 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14110003-14118239 Nucleotide Length: 4902 |
| Protein-coding | LOC_Os09g23740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46620 LOC_Os03g59020 LOC_Os02g22780 LOC_Os05g05470 LOC_Os03g04970 LOC_Os02g15610 LOC_Os07g10660 LOC_Os03g05980 LOC_Os05g46290 LOC_Os07g07709 LOC_Os03g58050 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os10g37060 LOC_Os11g29190 LOC_Os11g38959 LOC_Os12g07010 LOC_Os11g06750 LOC_Os10g28640 LOC_Os11g11390 LOC_Os12g39070 LOC_Os12g32240 LOC_Os12g21798 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g23740.1 |
| Rice Genome Annotation | LOC_Os09g23740.1 |
| Ricechip | LOC_Os09g23740.1 |
| KEGG | osa:4347005 dosa:Os09t0402300-01 |
| Entrez-Gene | 4347005 |