RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g24530.1 View Network Show in Genome Browser |
| Other Names | Os09g0411650 |
| Description | ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14607514-14609923 Nucleotide Length: 1488 |
| Protein-coding | LOC_Os09g24530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55970 LOC_Os05g09400 LOC_Os01g54540 LOC_Os03g18020 LOC_Os05g01110 LOC_Os06g43900 LOC_Os02g43600 LOC_Os01g27140 LOC_Os03g56820 LOC_Os03g11230 LOC_Os03g14040 More.. |
| Downstream Genes | LOC_Os12g35330 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5523 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g24530.1 |
| Rice Genome Annotation | LOC_Os09g24530.1 |
| Ricechip | LOC_Os09g24530.1 |
| KEGG | osa:9266797 dosa:Os09t0411650-01 |
| Entrez-Gene | 9266797 |