RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g24924.1 View Network Show in Genome Browser |
| Other Names | Os09g0416200 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14887051-14893288 Nucleotide Length: 1536 |
| Protein-coding | LOC_Os09g24924 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os01g38680 LOC_Os02g14110 LOC_Os04g42490 LOC_Os06g06090 LOC_Os03g17700 LOC_Os06g35540 LOC_Os05g01560 LOC_Os02g34510 LOC_Os01g42430 More.. |
| Downstream Genes | LOC_Os11g42160 LOC_Os11g06890 LOC_Os10g41190 LOC_Os12g31480 LOC_Os11g38160 LOC_Os12g31380 LOC_Os09g30418 LOC_Os09g30412 LOC_Os09g32050 LOC_Os10g30790 LOC_Os10g05800 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5827 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g24924.1 |
| Rice Genome Annotation | LOC_Os09g24924.1 |
| Ricechip | LOC_Os09g24924.1 |
| KEGG | osa:4347061 dosa:Os09t0416200-01 |
| Entrez-Gene | 4347061 |