RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g24990.1 View Network Show in Genome Browser |
| Other Names | Os09g0416800 |
| Description | CAF1 family ribonuclease containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14929156-14930269 Nucleotide Length: 843 |
| Protein-coding | LOC_Os09g24990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g07080 LOC_Os07g37790 LOC_Os04g52340 LOC_Os02g54120 LOC_Os03g52594 LOC_Os03g44900 LOC_Os03g57130 LOC_Os03g02680 LOC_Os04g39260 LOC_Os03g01850 LOC_Os03g01240 More.. |
| Downstream Genes | LOC_Os10g40780 LOC_Os10g27230 LOC_Os12g01190 LOC_Os10g25674 LOC_Os12g39070 LOC_Os11g45250 LOC_Os11g41610 LOC_Os10g29660 LOC_Os12g32380 LOC_Os11g01380 LOC_Os12g01390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g24990.1 |
| Rice Genome Annotation | LOC_Os09g24990.1 |
| Ricechip | LOC_Os09g24990.1 |
| KEGG | osa:4347066 dosa:Os09t0416800-01 |
| Entrez-Gene | 4347066 |