RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25314.1 View Network Show in Genome Browser |
| Other Names | Os09g0420700 |
| Description | cytochrome c oxidase copper chaperone, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15156995-15159086 Nucleotide Length: 222 |
| Protein-coding | LOC_Os09g25314 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03360 LOC_Os03g10930 LOC_Os07g44940 LOC_Os02g37000 LOC_Os02g06480 LOC_Os03g52400 LOC_Os03g36780 LOC_Os05g38580 LOC_Os02g41820 LOC_Os01g62210 LOC_Os05g51700 More.. |
| Downstream Genes | LOC_Os12g01390 LOC_Os11g01380 LOC_Os10g17280 LOC_Os12g42180 LOC_Os11g47760 LOC_Os12g19590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25314.1 |
| Rice Genome Annotation | LOC_Os09g25314.1 |
| Ricechip | LOC_Os09g25314.1 |
| KEGG | osa:4347084 dosa:Os09t0420700-01 |
| Entrez-Gene | 4347084 |