RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25460.1 View Network Show in Genome Browser |
| Other Names | Os09g0422000 |
| Description | transferase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15251886-15256328 Nucleotide Length: 1323 |
| Protein-coding | LOC_Os09g25460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42690 LOC_Os05g33130 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00521 rn00524 rn01110 rn00520 rn00051 rn00052 rn00010 rn01100 rn01120 rn00500 |
| Metacyc Pathways | P124-PWY PWY-6693 PWY-6531 PWY-842 PWY-621 P122-PWY SUCUTIL-PWY PWY-5384 PWY-3801 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25460.1 |
| Rice Genome Annotation | LOC_Os09g25460.1 |
| Ricechip | LOC_Os09g25460.1 |
| KEGG | osa:4347092 dosa:Os09t0422000-01 |
| Entrez-Gene | 4347092 |