RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25490.1 View Network Show in Genome Browser |
| Other Names | Os09g0422500 |
| Description | CESA9 - cellulose synthase, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15281268-15285910 Nucleotide Length: 3168 |
| Protein-coding | LOC_Os09g25490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54620 LOC_Os05g48850 LOC_Os03g30250 LOC_Os06g39520 LOC_Os05g48270 LOC_Os02g15230 |
| Downstream Genes | LOC_Os10g32980 LOC_Os09g36350 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 |
| Metacyc Pathways | PWY-1001 |
| Reference | |
|---|---|
| PubMed | 23017906 12970476 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25490.1 |
| Rice Genome Annotation | LOC_Os09g25490.1 |
| Ricechip | LOC_Os09g25490.1 |
| KEGG | osa:4347093 dosa:Os09t0422500-01 |
| Entrez-Gene | 4347093 |