RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25550.1 View Network Show in Genome Browser |
| Other Names | Os09g0423300 |
| Description | pentatricopeptide, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15328754-15332301 Nucleotide Length: 2889 |
| Protein-coding | LOC_Os09g25550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g07480 |
| Downstream Genes | LOC_Os11g28350 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5071 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25550.1 |
| Rice Genome Annotation | LOC_Os09g25550.1 |
| Ricechip | LOC_Os09g25550.1 |
| KEGG | osa:4347096 dosa:Os09t0423300-01 |
| Entrez-Gene | 4347096 |