RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25580.1 View Network Show in Genome Browser |
| Other Names | Os09g0423600 |
| Description | monogalactosyldiacylglycerol synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15349072-15355640 Nucleotide Length: 1608 |
| Protein-coding | LOC_Os09g25580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os01g33230 LOC_Os02g04500 LOC_Os04g56970 LOC_Os01g11260 LOC_Os05g37160 LOC_Os03g44420 LOC_Os07g38530 LOC_Os07g46640 LOC_Os01g37590 LOC_Os04g39030 More.. |
| Downstream Genes | LOC_Os10g40130 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00908 rn00561 rn01100 |
| Metacyc Pathways | PWY-2902 PWY-401 PWY-2881 PWY-2901 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25580.1 |
| Rice Genome Annotation | LOC_Os09g25580.1 |
| Ricechip | LOC_Os09g25580.1 |
| KEGG | osa:4347099 dosa:Os09t0423600-01 |
| Entrez-Gene | 4347099 |