RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25760.1 View Network Show in Genome Browser |
| Other Names | Os09g0425900 |
| Description | tetraspanin family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15444236-15446602 Nucleotide Length: 831 |
| Protein-coding | LOC_Os09g25760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g34140 LOC_Os02g33680 LOC_Os04g48850 LOC_Os08g18044 LOC_Os04g58850 LOC_Os04g39280 LOC_Os01g70790 LOC_Os01g08670 LOC_Os02g08440 LOC_Os01g50840 LOC_Os05g27730 More.. |
| Downstream Genes | LOC_Os09g37080 LOC_Os10g39770 LOC_Os09g34860 LOC_Os09g29310 LOC_Os10g28160 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25760.1 |
| Rice Genome Annotation | LOC_Os09g25760.1 |
| Ricechip | LOC_Os09g25760.1 |
| KEGG | osa:4347111 dosa:Os09t0425900-02 |
| Entrez-Gene | 4347111 |