RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25850.1 View Network Show in Genome Browser |
| Other Names | Os09g0426800 |
| Description | WAX2, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15492998-15497524 Nucleotide Length: 1860 |
| Protein-coding | LOC_Os09g25850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04260 LOC_Os07g01150 LOC_Os08g16260 LOC_Os06g33200 LOC_Os07g06990 LOC_Os08g41280 LOC_Os03g09900 LOC_Os01g21990 LOC_Os01g66000 LOC_Os04g42620 LOC_Os05g01810 More.. |
| Downstream Genes | LOC_Os10g39810 LOC_Os11g27264 LOC_Os10g01920 LOC_Os12g34524 LOC_Os12g37650 LOC_Os11g26190 LOC_Os11g02350 LOC_Os10g05970 LOC_Os09g32470 LOC_Os10g06000 LOC_Os10g05990 More.. |
| Reference | |
|---|---|
| PubMed | 21809091 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25850.1 |
| Rice Genome Annotation | LOC_Os09g25850.1 |
| Ricechip | LOC_Os09g25850.1 |
| KEGG | osa:4347115 dosa:Os09t0426800-01 |
| Entrez-Gene | 4347115 |