RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g25990.1 View Network Show in Genome Browser |
| Other Names | Os09g0429400 |
| Description | glutamate receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 15610715-15616401 Nucleotide Length: 2850 |
| Protein-coding | LOC_Os09g25990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56580 LOC_Os06g18000 LOC_Os04g58090 LOC_Os06g19730 LOC_Os05g37980 LOC_Os06g07830 LOC_Os02g55970 LOC_Os06g45050 LOC_Os05g47550 LOC_Os02g07900 LOC_Os01g50010 More.. |
| Downstream Genes | LOC_Os11g40090 LOC_Os10g07229 LOC_Os11g05730 LOC_Os10g34040 LOC_Os11g38780 LOC_Os10g23090 LOC_Os09g28630 LOC_Os11g09010 LOC_Os10g38930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396e-3p osa-miR5145 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g25990.1 |
| Rice Genome Annotation | LOC_Os09g25990.1 |
| Ricechip | LOC_Os09g25990.1 |
| KEGG | osa:4347123 dosa:Os09t0429400-00 |
| Entrez-Gene | 4347123 |