RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g26700.1 View Network Show in Genome Browser |
| Other Names | Os09g0438400 |
| Description | choline/ethanolamine kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16224958-16229508 Nucleotide Length: 1167 |
| Protein-coding | LOC_Os09g26700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32160 LOC_Os06g45860 LOC_Os07g47820 LOC_Os03g02640 LOC_Os02g53770 LOC_Os02g10310 LOC_Os01g27730 LOC_Os05g45880 LOC_Os01g08760 LOC_Os02g38060 LOC_Os03g17780 More.. |
| Downstream Genes | LOC_Os09g38790 LOC_Os10g42320 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5534a |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g26700.1 |
| Rice Genome Annotation | LOC_Os09g26700.1 |
| Ricechip | LOC_Os09g26700.1 |
| KEGG | osa:4347160 dosa:Os09t0438400-00 |
| Entrez-Gene | 4347160 |