RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g26760.1 View Network Show in Genome Browser |
| Other Names | Os09g0439000 |
| Description | DNA repair metallo-beta-lactamase family protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16252173-16257558 Nucleotide Length: 2901 |
| Protein-coding | LOC_Os09g26760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g29100 LOC_Os04g55120 LOC_Os04g33220 LOC_Os03g50940 LOC_Os04g28180 LOC_Os02g28810 LOC_Os01g04260 LOC_Os01g57110 LOC_Os01g72880 LOC_Os09g24220 LOC_Os05g19270 More.. |
| Downstream Genes | LOC_Os12g32992 LOC_Os10g34750 LOC_Os11g40150 LOC_Os12g31370 LOC_Os10g17990 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g26760.1 |
| Rice Genome Annotation | LOC_Os09g26760.1 |
| Ricechip | LOC_Os09g26760.1 |
| KEGG | osa:4347162 dosa:Os09t0439000-00 |
| Entrez-Gene | 4347162 |