RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g26810.1 View Network Show in Genome Browser |
| Other Names | Os09g0439500 |
| Description | chlorophyll A-B binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16287916-16290862 Nucleotide Length: 795 |
| Protein-coding | LOC_Os09g26810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os07g30670 LOC_Os03g55970 LOC_Os09g10750 LOC_Os05g01950 LOC_Os01g28540 LOC_Os03g50810 LOC_Os03g10060 LOC_Os04g09720 LOC_Os08g25900 LOC_Os02g51790 More.. |
| Downstream Genes | LOC_Os09g34140 LOC_Os12g29760 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 LOC_Os11g42390 LOC_Os10g32400 LOC_Os10g32348 LOC_Os09g30100 LOC_Os10g15300 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g26810.1 |
| Rice Genome Annotation | LOC_Os09g26810.1 |
| Ricechip | LOC_Os09g26810.1 |
| KEGG | osa:4347166 dosa:Os09t0439500-01 |
| Entrez-Gene | 4347166 |