RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g26900.1 View Network Show in Genome Browser |
| Other Names | Os09g0440700 |
| Description | ctr copper transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16347080-16347909 Nucleotide Length: 450 |
| Protein-coding | LOC_Os09g26900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g41440 LOC_Os02g02700 LOC_Os02g45344 LOC_Os07g16950 LOC_Os03g62680 LOC_Os02g07160 LOC_Os07g14150 |
| Downstream Genes | LOC_Os12g06620 LOC_Os12g43100 |
| Reference | |
|---|---|
| PubMed | 21510855 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g26900.1 |
| Rice Genome Annotation | LOC_Os09g26900.1 |
| Ricechip | LOC_Os09g26900.1 |
| KEGG | osa:4347173 dosa:Os09t0440700-02 |
| Entrez-Gene | 4347173 |