RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27050.1 View Network Show in Genome Browser |
| Other Names | Os09g0442600 |
| Description | HD domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16455036-16458599 Nucleotide Length: 2127 |
| Protein-coding | LOC_Os09g27050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g14040 LOC_Os02g08260 LOC_Os01g01920 LOC_Os03g57870 LOC_Os01g06020 LOC_Os04g42520 LOC_Os01g52110 LOC_Os07g30150 LOC_Os03g20460 LOC_Os02g40010 LOC_Os02g51830 More.. |
| Downstream Genes | LOC_Os10g34470 LOC_Os12g33100 LOC_Os12g39860 LOC_Os12g40130 LOC_Os09g33460 LOC_Os12g01916 |
| Pathways | |
|---|---|
| Metacyc Pathways | PPGPPMET-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27050.1 |
| Rice Genome Annotation | LOC_Os09g27050.1 |
| Ricechip | LOC_Os09g27050.1 |
| KEGG | osa:4347182 dosa:Os09t0442600-01 |
| Entrez-Gene | 4347182 |