RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27370.1 View Network Show in Genome Browser |
| Other Names | Os09g0446200 |
| Description | Spc97 / Spc98 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16633305-16636534 Nucleotide Length: 2526 |
| Protein-coding | LOC_Os09g27370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42330 LOC_Os05g06450 LOC_Os06g51400 LOC_Os03g61100 LOC_Os03g30830 LOC_Os01g55820 LOC_Os01g73514 LOC_Os02g39800 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 More.. |
| Downstream Genes | LOC_Os10g27190 LOC_Os10g39410 LOC_Os09g38020 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5524 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27370.1 |
| Rice Genome Annotation | LOC_Os09g27370.1 |
| Ricechip | LOC_Os09g27370.1 |
| KEGG | osa:4347202 dosa:Os09t0446200-01 |
| Entrez-Gene | 4347202 |