RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27450.1 View Network Show in Genome Browser |
| Other Names | Os09g0447000 |
| Description | homeobox associated leucine zipper, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16674571-16676359 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os09g27450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04870 LOC_Os02g14840 LOC_Os01g55200 LOC_Os08g04270 LOC_Os02g17970 LOC_Os06g04850 LOC_Os06g07830 LOC_Os02g55970 LOC_Os01g45990 LOC_Os01g11250 LOC_Os08g04290 More.. |
| Downstream Genes | LOC_Os10g23090 LOC_Os10g26500 LOC_Os10g35930 LOC_Os10g39120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27450.1 |
| Rice Genome Annotation | LOC_Os09g27450.1 |
| Ricechip | LOC_Os09g27450.1 |
| KEGG | osa:4347205 dosa:Os09t0447000-00 |
| Entrez-Gene | 4347205 |