RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27700.1 View Network Show in Genome Browser |
| Other Names | Os09g0450300 |
| Description | microtubule associated protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16855316-16861064 Nucleotide Length: 1788 |
| Protein-coding | LOC_Os09g27700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g54870 LOC_Os07g05470 LOC_Os08g40420 LOC_Os03g06350 LOC_Os03g37330 LOC_Os05g05220 LOC_Os04g44810 LOC_Os09g17850 LOC_Os02g46320 LOC_Os01g49290 LOC_Os03g08830 More.. |
| Downstream Genes | LOC_Os12g05810 LOC_Os11g06750 LOC_Os11g29390 LOC_Os12g07010 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27700.1 |
| Rice Genome Annotation | LOC_Os09g27700.1 |
| Ricechip | LOC_Os09g27700.1 |
| KEGG | osa:4347221 dosa:Os09t0450300-01 |
| Entrez-Gene | 4347221 |