RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27820.1 View Network Show in Genome Browser |
| Other Names | Os09g0451400 |
| Description | 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16925457-16927082 Nucleotide Length: 969 |
| Protein-coding | LOC_Os09g27820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g07450 LOC_Os05g48930 |
| Downstream Genes | LOC_Os12g43640 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 rn01110 |
| Metacyc Pathways | ETHYL-PWY |
| Reference | |
|---|---|
| PubMed | 20040065 17012402 8759917 21487048 21911595 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27820.1 |
| Rice Genome Annotation | LOC_Os09g27820.1 |
| Ricechip | LOC_Os09g27820.1 |
| KEGG | osa:4347225 dosa:Os09t0451400-01 |
| Entrez-Gene | 4347225 |