RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g27940.1 View Network Show in Genome Browser |
| Other Names | Os09g0452800 |
| Description | aspartic proteinase nepenthesin-1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 16977482-16979133 Nucleotide Length: 1362 |
| Protein-coding | LOC_Os09g27940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g36530 LOC_Os01g56930 LOC_Os05g43570 LOC_Os07g01150 LOC_Os09g27910 LOC_Os03g14260 LOC_Os07g10600 LOC_Os03g30830 LOC_Os01g55820 LOC_Os08g09190 |
| Downstream Genes | LOC_Os11g48020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g27940.1 |
| Rice Genome Annotation | LOC_Os09g27940.1 |
| Ricechip | LOC_Os09g27940.1 |
| KEGG | osa:4347233 dosa:Os09t0452800-01 |
| Entrez-Gene | 4347233 |