RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28000.1 View Network Show in Genome Browser |
| Other Names | Os09g0453400 |
| Description | OsSigP6 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17003030-17005694 Nucleotide Length: 1236 |
| Protein-coding | LOC_Os09g28000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g10649 LOC_Os09g14610 LOC_Os04g43050 LOC_Os03g02970 LOC_Os03g38740 LOC_Os05g18850 LOC_Os01g68120 LOC_Os06g25250 LOC_Os05g49220 LOC_Os05g24160 LOC_Os06g05250 More.. |
| Downstream Genes | LOC_Os10g34430 LOC_Os12g01916 LOC_Os09g33460 LOC_Os11g01869 LOC_Os11g14170 LOC_Os11g05556 LOC_Os11g05570 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28000.1 |
| Rice Genome Annotation | LOC_Os09g28000.1 |
| Ricechip | LOC_Os09g28000.1 |
| KEGG | osa:4347239 dosa:Os09t0453400-01 |
| Entrez-Gene | 4347239 |