RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28019.1 View Network Show in Genome Browser |
| Other Names | Os09g0453500 |
| Description | nucleoporin p58/p45, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17008658-17014365 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os09g28019 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63780 LOC_Os01g10350 LOC_Os06g20090 LOC_Os08g01054 LOC_Os07g46180 LOC_Os01g21940 LOC_Os03g22690 LOC_Os05g49890 LOC_Os03g18180 LOC_Os08g07960 LOC_Os02g10790 More.. |
| Downstream Genes | LOC_Os11g42420 LOC_Os12g38110 LOC_Os11g03794 LOC_Os12g03540 LOC_Os12g06890 LOC_Os12g06870 LOC_Os11g24570 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28019.1 |
| Rice Genome Annotation | LOC_Os09g28019.1 |
| Ricechip | LOC_Os09g28019.1 |
| KEGG | osa:4347240 dosa:Os09t0453500-01 |
| Entrez-Gene | 4347240 |