RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28050.3 View Network Show in Genome Browser |
| Other Names | Os09g0453800 |
| Description | asparate aminotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17024575-17028551 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os09g28050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01010 LOC_Os02g57220 LOC_Os03g51600 LOC_Os06g37180 LOC_Os01g51380 LOC_Os02g14110 LOC_Os09g17840 LOC_Os09g17830 LOC_Os03g11440 LOC_Os05g23620 LOC_Os09g07820 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os12g08260 LOC_Os11g14220 LOC_Os11g04070 LOC_Os12g03880 LOC_Os10g11200 LOC_Os12g43630 LOC_Os10g41150 LOC_Os11g31640 LOC_Os10g25130 LOC_Os10g25140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28050.3 |
| Rice Genome Annotation | LOC_Os09g28050.3 |
| Ricechip | LOC_Os09g28050.3 |
| KEGG | osa:4347242 dosa:Os09t0453800-01 |
| Entrez-Gene | 4347242 |