RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28100.1 View Network Show in Genome Browser |
| Other Names | Os09g0454100 |
| Description | OsRhmbd15 - Putative Rhomboid homologue, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17059795-17062359 Nucleotide Length: 1050 |
| Protein-coding | LOC_Os09g28100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55740 LOC_Os01g18100 LOC_Os01g45620 LOC_Os02g40860 LOC_Os05g02530 LOC_Os02g56560 LOC_Os01g43910 LOC_Os05g49140 LOC_Os01g47530 LOC_Os05g04340 LOC_Os06g26340 More.. |
| Downstream Genes | LOC_Os10g33650 LOC_Os12g38860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28100.1 |
| Rice Genome Annotation | LOC_Os09g28100.1 |
| Ricechip | LOC_Os09g28100.1 |
| KEGG | osa:4347244 dosa:Os09t0454100-01 |
| Entrez-Gene | 4347244 |