RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28420.1 View Network Show in Genome Browser |
| Other Names | Os09g0457800,Os09g0457600 |
| Description | alpha-amylase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17296166-17305076 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os09g28420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41140 LOC_Os02g56850 LOC_Os03g56580 LOC_Os06g05740 LOC_Os04g32330 LOC_Os08g05880 LOC_Os02g32490 LOC_Os04g17050 LOC_Os04g58090 LOC_Os05g23260 LOC_Os07g40630 More.. |
| Downstream Genes | LOC_Os09g39570 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28420.1 |
| Rice Genome Annotation | LOC_Os09g28420.1 |
| Ricechip | LOC_Os09g28420.1 |
| KEGG | osa:4347265 dosa:Os09t0457800-01dosa:Os09t0457600-00 |
| Entrez-Gene | 4347265 |