RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28560.1 View Network Show in Genome Browser |
| Other Names | Os09g0459600 |
| Description | protein phosphotase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17366407-17371403 Nucleotide Length: 1269 |
| Protein-coding | LOC_Os09g28560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32360 LOC_Os01g38950 LOC_Os05g51560 LOC_Os01g51200 LOC_Os04g35114 LOC_Os02g12450 LOC_Os02g12660 LOC_Os05g40180 LOC_Os02g40860 LOC_Os02g12810 LOC_Os02g17910 More.. |
| Downstream Genes | LOC_Os10g10870 LOC_Os11g07140 LOC_Os11g39450 LOC_Os12g38860 LOC_Os12g12860 LOC_Os11g35500 LOC_Os10g42950 LOC_Os11g36180 LOC_Os11g11780 LOC_Os10g33650 LOC_Os12g19290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28560.1 |
| Rice Genome Annotation | LOC_Os09g28560.1 |
| Ricechip | LOC_Os09g28560.1 |
| KEGG | osa:4347278 dosa:Os09t0459600-01 |
| Entrez-Gene | 4347278 |