RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28570.1 View Network Show in Genome Browser |
| Other Names | Os09g0459800 |
| Description | zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17377008-17388960 Nucleotide Length: 1905 |
| Protein-coding | LOC_Os09g28570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08999 LOC_Os02g42520 LOC_Os02g57040 |
| Downstream Genes | LOC_Os10g07229 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn01100 rn01110 rn01120 |
| Metacyc Pathways | PWY-5082 PWY-5079 PWY-5076 PWY-5057 P127-PWY FERMENTATION-PWY PWY-3801 PWY66-21 PWY-5078 THREONINE-DEG2-PWY THRDLCTCAT-PWY PWY-5448 ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28570.1 |
| Rice Genome Annotation | LOC_Os09g28570.1 |
| Ricechip | LOC_Os09g28570.1 |
| KEGG | osa:4347279 dosa:Os09t0459800-01 |
| Entrez-Gene | 4347279 |