RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28610.1 View Network Show in Genome Browser |
| Other Names | Os09g0460200 |
| Description | protein transport protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17405811-17413209 Nucleotide Length: 2199 |
| Protein-coding | LOC_Os09g28610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23620 LOC_Os07g46370 LOC_Os02g04320 LOC_Os04g04020 LOC_Os06g12090 LOC_Os05g44310 LOC_Os06g44890 LOC_Os03g24220 LOC_Os08g14230 LOC_Os04g51440 LOC_Os05g06110 More.. |
| Downstream Genes | LOC_Os11g29200 LOC_Os12g37360 LOC_Os12g24250 LOC_Os12g44150 LOC_Os11g11390 LOC_Os11g04070 LOC_Os12g03880 LOC_Os10g30090 LOC_Os11g16410 LOC_Os10g27190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28610.1 |
| Rice Genome Annotation | LOC_Os09g28610.1 |
| Ricechip | LOC_Os09g28610.1 |
| KEGG | osa:4347283 dosa:Os09t0460200-00 |
| Entrez-Gene | 4347283 |